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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015900521.1_cds_XP_016450561.1_44997
CDS Infomation

[gene=LOC107775344] [db_xref=GeneID:107775344] [protein=putative pectate lyase 2] [protein_id=XP_016450561.1] [location=complement(join(2772..2987,3153..3282,3362..3465,3655..4356))] [gbkey=CDS]
Sequence

ATGTCTTCTTTAGCATTTGTACTTACTCTTCTTTTTTTGGGTATATCAACTTTACATGCC
GAGTATTATGCACCTCTTCCTTATAGTTATAGTTATGCACCTACTACTAAAAAAACTACG
AATGTGATTGATTCTTGTTGGCGTACCAAATCAAATTGGGCCAAGAACCGCCGTGCATTG
GCTGATTGTGCCGTCGGCTACGGCAAAGCTGCCATCGGAGGGAAATTGGGTGCCATATAT
GTCGTTACTAATCCGTCGGACGACCCCGTAAACCCTAAACCAGGTACACTAAGATATGGT
GTAATTCAATCCAAACCACTATGGATTACTTTCGCCAAAAACATGGTTATAACACTAAAG
AATGAGCTTATGATCAATAGTTACAAGACTATAGATGGAAGAGGAGCTAAAGTGGAGATT
GCATATGGACCTTGTATCACAATTGCACATGTTAGCCATGTGATTATACATGGGATTAGC
ATCCATGATTGTAAGCCTGGTAAAAAAGGCATTGTGCGGGATAGTCCGGTGCATGCCGGC
CATCGTGGCGGCGCTGACGGAGACGGTATTGATATTTTTCATTCTTCTCATATTTGGATC
GACCATTGCTATCTTGCACGTTGCACCGATGGCCTTATTGACGTTATTCATGCTTCTACT
GCTGTTACCATCTCCAACAACTACTTCACTCAGCATGATAAAGTTATGTTATTTGGGCAC
AATGATAACAATAAAGAAGACAAGATTATGAAAGTGACGGTAGCCTTCAACTACTTTGGC
CCTGGTTTAATAGAACGAATGCCAAGAGTGAGGCTAGGTTATGCTCATGTGGCCAACAAT
CGGTACGAAAAATGGTTGATGTATGCTATTGGTGGAAGTGCAAATCCAACCATCTTCAGT
GAAGGAAATTATTTCATGGCATATAAATCCACACAAGTTACGAAGAGGGAAGCAAAGAAT
GGGTGGAAGAATTGGAAGTGGAGGTCTTCAAAGGATAAATTTATGAATGGAGCATATTTT
ATACCATCTGGATATGGAAGTACTAATCCATATTACTCAAAGGCTCAGTCATTTCCTGTG
GCTGATGGATCTATGGTTCCTTCTTTAACTGCTGATGCTGGACCTTTACGTTGCACATCC
TATAAATGTTAA

Peptide Sequence

PEP ID

XP_016450561.1
PEP Infomation

PREDICTED: putative pectate lyase 2 [Nicotiana tabacum]
Sequence

MSSLAFVLTLLFLGISTLHAEYYAPLPYSYSYAPTTKKTTNVIDSCWRTKSNWAKNRRAL
ADCAVGYGKAAIGGKLGAIYVVTNPSDDPVNPKPGTLRYGVIQSKPLWITFAKNMVITLK
NELMINSYKTIDGRGAKVEIAYGPCITIAHVSHVIIHGISIHDCKPGKKGIVRDSPVHAG
HRGGADGDGIDIFHSSHIWIDHCYLARCTDGLIDVIHASTAVTISNNYFTQHDKVMLFGH
NDNNKEDKIMKVTVAFNYFGPGLIERMPRVRLGYAHVANNRYEKWLMYAIGGSANPTIFS
EGNYFMAYKSTQVTKREAKNGWKNWKWRSSKDKFMNGAYFIPSGYGSTNPYYSKAQSFPV
ADGSMVPSLTADAGPLRCTSYKC

Transcript Sequence

Gene sequence data has not been registered.